All the three seats were earlier with the Congress. The outcome of the by-elections would be watched keenly ahead of Assembly elections in BJP-ruled Madhya Pradesh due later this year. BJD-ruled Odisha will go to polls next year.
Mungaoli and Kolaras Assembly constituencies in Madhya Pradesh recorded 77 per cent and 70 per cent voter turnout respectively.
An Election Commission official said minor clashes between political workers were reported from some areas.
The Congress has fielded Mahendra Singh Yadav from Kolaras and Brijendra Singh Yadav from Mungaoli, while the BJP has fielded Baisahab Yadav from Mungaoli and Devendra Jain from Kolaras.
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Overall, 13 candidates are in the fray in Mungaoli and 22 in Kolaras.
The bypolls were necessitated due to the death of Congress's Mungaoli MLA Mahendra Singh Kalukheda and its Kolaras MLA Ram Singh Yadav.
Both seats are in the Guna Lok Sabha constituency, represented by Jyotiraditya Scindia. Kolaras and Mungaoli have 2,44,457 and 1,91,009 eligible voters respectively.
No untoward incident was reported in the five Naxal-affected polling stations in the Assembly segment, located in Bargarh district.
It was a smooth affair barring brief interruptions in some booths in the early stage of voting, due to technical snags in Voter Verifiable Paper Audit Trail (VVPAT) machines, the official told reporters.
Kumar said that the presiding officer of booth No.193 was placed under suspension with immediate effect, after he was found trying to influence voters in favour of a particular candidate.
Counting of votes for all the three seats would be undertaken on February 28. It appeared to be a triangular contest among nominees of the ruling BJD, the Congress and the BJP in Odisha.
The by-poll was necessitated due to the death of Congress MLA Subal Sahu in August last year.
Subal Sabu's wife Rita Sahu has been fielded this time by the BJD, while Ashok Panigrahi is nominated by the BJP, and Pranay Sahu by the Congress.
Of the 281 booths, 155 were identified as critical.
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