Modern humans are the only primates that carry this genetic mutation that potentially increased tolerance to toxic materials produced by fires for cooking, protection and heating, said Gary Perdew, professor at Pennsylvania State University.
At high concentrations, smoke-derived toxins can increase the risk of respiratory infections. For expectant mothers, exposure to these toxins can increase the chance of low birth weight and infant mortality.
The mutation may have offered ancient humans a sweet spot in effectively processing some of these toxins - such as dioxins and polycyclic aromatic hydrocarbons.
The researchers suggested that a difference in the aryl hydrocarbon receptor - which regulates the body's response to polycyclic aromatic hydrocarbons - between humans, Neanderthals and other non-human primates may have made humans more desensitised to certain smoke toxins.
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"For Neanderthals, inhaling smoke and eating charcoal-broiled meat, they would be exposed to multiple sources of polycyclic aromatic hydrocarbons, which are known to be carcinogens and lead to cell death at high concentrations," said Perdew.
There is evidence that both humans and Neanderthals used fire, said George Perry, assistant professor at Penn State.
"Our hominin ancestors were likely using fire at least a million years ago, and some infer an earlier control and use of fire approximately 2 million years ago," said Perry.
Fire would have played an important role for both humans and Neanderthals.
The study may also lend support to a recent theory that the invention of cooking may have helped humans thrive, according to Perdew.
The findings appear in the journal Molecular Biology and Evolution.