Three unmanned aerial vehicles (UAVs) carrying six boxes of passionfruit with a combined weight of around 12 kilograms flew from Putian in China's eastern Fujian Province to nearby Meizhou Island on October 31, the company said in a statement.
Flying into a strong wind, the drones took nine minutes to make the five-kms crossing. Each drone can carry up to seven kilograms, state-run Xinhua news agency reported, citing the statement.
The drones were jointly developed by Alibaba's delivery arm Cainiao Network, the company's rural shopping platform Rural Taobao, and a domestic technology firm.
Alibaba has prepared extra drones ahead of the upcoming November 11 "Singles' Day" shopping festival.
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The day, which can be compared to Black Friday in the US, became a shopping festival in China after Alibaba launched a major promotional campaign in 2009.
Alibaba plans to use drones to deliver high value-added products such as fresh food and medical supplies over water in the future.
Using drones to deliver packages has increased in recent years.