She also called as "disturbing" the death threats issued to Bhansali and Padukone.
"Padmavati" has been facing the wrath of various Rajput groups and political leaders, who have accused Bhansali of distorting history.
Many groups have been protesting amid rumours that there was a romantic dream sequence between Rajput queen Padmini and Allauddin Khilji.
"As a human being, any kind of threat of violence is very disturbing. Whether it is against Sanjay sir or Deepika, it is very worrying when such statements are issued," Soha told PTI in an interview.
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Soha, who refrained to comment much on the issue, insisted that an artiste's primary motive is never to offend any person or group.
"This particular incident has become extremely controversial. The team itself has been advised not to make any comment, so I think someone as me who is far removed and doesn't have access to their information should not make any comments.
The film has been hitting road blocks one after another, with Rajasthan, Uttar Pradesh, Madhya Pradesh and Gujarat, banning the film.
Historians are divided on whether Padmini actually existed. She finds mention in the 16th century epic poem "Padmavat".
Soha is currently awaiting the release of her book, "The Perils of Being Moderately Famous", which is scheduled to come out in December.