In a letter to Health Minister V S Sivakumar, Association general secretary Rejith Ananad said the policy was silent on the 'co-location' of Ayurveda systems in Primary Health Centres, community health centres and district hospitals.
The 'co-location' system has been introduced in many states, including neighbouring Tamil Nadu.
"We earnestly hope that the government would not allow any one medical system to dominate and control the health sector and ensure that all good elements from each system is included in the policy," the letter said.