The bishops yesterday approved a final report covering a host of issues related to Catholic family life, acknowledging there were "positive elements" in civil heterosexual unions outside the church and even in cases when men and women were living together outside marriage.
They also said the church must respect Catholics in their moral evaluation of "methods used to regulate births," a seemingly significant deviation from church teaching barring any form of artificial contraception.
Two other paragraphs concerning the other hot-button issue at the synod of bishops whether divorced and civilly remarried Catholics can receive Communion also failed to pass.
The Vatican spokesman, the Rev Federico Lombardi, said the failure of the paragraphs to pass meant that they have to be discussed further to arrive at a consensus at a meeting of bishops next October.
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It could be that the 118-62 vote on the gay paragraph was a protest vote of sorts by progressive bishops who refused to back the watered-down wording and wanted to keep the issue alive. The original draft had said gays had gifts to offer the church and that their partnerships, while morally problematic, provided gay couples with "precious" support.
"Personally I would have been very worried and saddened if there hadn't been these ... Animated discussions ... Or if everyone had been in agreement or silent in a false and acquiescent peace," Francis told the synod hall after the vote.
"We could see that there were different viewpoints," said Cardinal Oswald Gracis of India, when asked about the most contentious sections of the report on homosexuals and divorced and remarried Catholics.