Chief Minister Mehbooba Mufti said the security personnel involved in the killing of the youth will be given exemplary punishment as such incidents cannot be tolerated since these have a "negative impact" on the state government's efforts to consolidate peace efforts.
Army ordered an inquiry while Jammu and Kashmir Police registered a criminal case and began investigations into the incident which triggered more protests in Handwara and had an echo in Srinagar and Pulwama districts of Kashmir as well.
Giving details of the incident, the police spokesman said within minutes of alleged incident of molestation by an army man, public in large numbers gathered there and attacked the army bunker in Handwara chowk.
They assaulted the personnel deployed there, ransacked the bunker and attempted to set fire to the bunker, he said.
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"In retaliation, the security forces deployed (there) used force to disperse the violent rampaging mob. In the process, two individuals -- Mohammad Iqbal and Nayeem Qadir Bhat sustained fire-arm injuries," the spokesman said.
The police spokesman said a criminal case has been registered into the Handwara incident and investigations started to ascertain the facts.
Nayeem, a student of Government Degree College Handwara, was a budding top order batsman, who had attended an Under-19 national level camp three years ago, his friends said.
Several photographs of Nayeem at various cricketing events, including a net session with Jammu and Kashmir's star all-rounder Parvez Rasool, were being circulated on social networking sites soon after his death.
The incident in Handwara had an echo in Srinagar, the summer capital of the state, as also in Pulwama in south Kashmir, where protests erupted and stone-pelting incidents were reported at some places, the official said.
Additional police personnel have been deployed in sensitive areas of the city to maintain law and order.