Noting that the EC's order defied the "principles of natural justice", AAP's Delhi unit's chief spokesperson Saurabh Bharadwaj said the poll panel did not hear the MLAs' case.
He, however, stated that the party is yet to get any official communication on the matter.
Senior AAP leader Ashutosh said the Election Commission had never touched this low.
The Election Commission is learnt to have recommended to the President the disqualification of the 20 AAP MLAs for allegedly holding office of profit.
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Hitting out at Joti, Bharadwaj said the decision comes at a time when the Chief Election Commissioner is due to retire on January 23.
"A K Joti was the principal secretary under (the then Gujarat Chief Minister) Narendra Modi and then the chief secretary of Gujarat. He is retiring on Monday. So you want to repay Modi ji's debt. You are mortgaging a constitutional post like the Election Commission," he alleged.
This is not the first time the AAP has targeted the Election Commission. In the past, it had hit out at the poll panel on the electronic voting machines issue.
"The hearing before the Election Commission was not about disqualification. The ongoing hearing was whether the Election Commission can hear the Office of Profit proceedings when the Delhi High Court has stated that they are not parliamentary secretaries," Bharadwaj claimed.
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