In number of cases delay occurs in payment of Central Government Employees Group Insurance Scheme (CGEGIS) dues owing to missing entries.
The issue was considered in consultation with Department of Pension and Pensioners' Welfare and Controller General of Accounts, the ministry said in a circular.
"It has been decided that in order to ease the process of payment of Savings Fund on account of CGEGIS at the time of retirement...Payment of accumulation under the Savings Fund of CGEGIS be made without awaiting confirmation of deduction of each monthly subscription of CGEGIS...," it said.
All ministries and departments have been asked to ensure compliance of the new instructions so that the dues of CGEGIS of government servants retiring on attaining the age of superannuation are "discharged with due promptness".
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There are about 48.85 lakh central government employees.
Earlier this month, the Union Cabinet had approved release of an additional instalment of dearness allowance to central government employees and dearness relief to pensioner with effect from January 1, 2017.