The council had offered Suu Kyi the Freedom of Glasgow in 2009, when she was still under house arrest as Myanmars pro- democracy leader.
"I and the Leader, Councillor Susan Aitken, recently wrote to Aung San Suu Kyi voicing the city's concerns about the human rights atrocities occurring under her watch and urging her to intervene. The response we received was disappointing and saddening, saidGlasgow's Lord Provost Eva Bolander.
The Scottish council said that withdrawing such an honour was "unprecedented" and its decision had not been taken lightly.
"In response to the ongoing humanitarian crisis in Myanmar of the Rohingya people, various UK cities have revoked the Freedom of the City from Aung San Suu Kyi. I'm delighted there was cross-party support for my motion," said Councillor Soryia Siddique from Sheffield Council.
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Meanwhile, the London School of Economics (LSE) has taken the first step towards withdrawing an honorary presidency bestowed upon Myanmars de-facto leader.
The Students Union has moved a motion to withdraw the honour, which will come up for debate next week.
"We condemn the Muslim genocide in Myanmar, we condemn all Islamophobia, and we will actively work against any system which is complicit in supporting the violence."
A series of UK institutions have been distancing themselves from the Nobel Peace laureate in the wake of Myanmar Armys repression of the Rohingya minority, nearly 1 million of whom have fled their homes to refugee camps in Bangladesh.
While the move was not overtly linked to the Rohingya crisis, it is widely believed that the allegations of ethnic cleansing in Myanmar were behind the decision to remove the portrait from the college where Suu Kyi had studied.
Last month, Oxford City Council voted unanimously in favour of revoking the Freedom of Oxford granted to the Myanmar chief in 1997 for her "long struggle for democracy".
The City of London Corporation has also been debatingrevokingSuuKyis Honorary Freedom, bestowed upon her earlier this year.
The Myanmar leader has come under severe criticism for her failure to openly condemn Myanmars armed forces, and instead claimed there had been no conflicts since September 5 and no clearance operations against the countrys Muslim minority.
She visited the Rakhine province of Myanmar this week for the first time since violence erupted in the state in late August and was criticised for failing to address the issue of refugees who have fled across the border.
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