"Certainly, if at all he said this, I do not agree with him. Rape has no religion. Terror has no religion. They are crimes and they should be curbed," he told the Headlines Today.
Bajpayi had created a controversy by accusing men belonging to a community for raping women belonging to another community as they belonged to a particular religion.
Asked whether Prime Minister Narendra Modi also disagrees with such statements, Naidu, Parliamentary Affairs Minister, said government disagrees with it.