The Court also said that as a note of caution the state shall not intrude into the privacy of citizens to find out if they are in possession of beef or any other form of meat.
A division bench headed by Justice V M Kanade held that no stay can be given until the final hearing of a bunch of petitions challenging the beef ban which was fixed for June 25.
The Maharashtra Animal Preservation (Amendment) Act, enforced last month by the state government, bans slaughter of cows, bulls and bullocks and also consumption and possession of their meat.
Three petitions were filed challenging Sections 5(d) and 9(a) of the Act which prohibits possession, transportation and consumption of meat of cow, bulls and bullocks even if the animals have been slaughtered outside Maharashtra.
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According to the petitions, this puts a ban on import of meat. The petitions sought a stay on these sections.
"This is because the Act had been introduced suddenly and reasonable time was not given to the traders to dispose of their products," said the judges.
However, FIRs can be registered against such traders but no further action can be taken until the petitions are decided finally or three months whichever is earlier, the court said.
The court also clarified that since ban on beef continues in the State under the Act, FIRs can be registered against slaughter of cows, bulls and bullocks.
The judges said they were of the view that the traders had not been given reasonable time to dispose of the beef products as the Act was brought in all of a sudden. Hence they directed the State not to take coercive steps against them though FIR can be registered.
"There can be no compelling reason for the State to impose ban without giving a reasonable opportunity to traders provided they abided by the rules on food hygiene and safety," they said in the order.