The plea also sought separate shelter homes for women.
A bench of Chief Justice G Rohini and Justice Sangita Dhingra Sehgal directed the Delhi government's social welfare department to take instruction on the plea which said though men and women sleep in different shelters, the buildings were in the same compound.
The plea by social activist -- Salek Chand Jain, sought direction to the department concerned to provide more space for shelter homes in accordance with the 2021 Master Plan for Delhi.
Citing various rape and molestation incidents in his plea, the petitioner said the adults often entered the place in an inebriated condition and commited crimes against children.
The offenders went scot free after committing crimes in shelter homes, the plea filed through advocate Sugriva Dubey alleged.
It alleged the shelters hardly protected children and women from leering men, who peeped, stalked, molestated or raped despite the government's claims of building the shelters for the safety of the homeless.