The dark-bearded guerrilla leader lies in a stretcher with his dead eyes open, his bare chest stained with blood and dirt, in the eight black and white photographs taken after he was shot by the Bolivian army in October 1967.
The photographs belong to Imanol Arteaga, a local councillor in the northern Spanish town of Ricla. He inherited them from his uncle Luis Cuartero, a missionary in Bolivia in the 1960s.
He and his aunt found the photos among Cuartero's belongings after the missionary died in 2012.
"I remembered he had photographs of Che Guevara and my aunt said: 'Yes, I know where they are," Arteaga said. "They were in boxes with a load of photos of Bolivia."
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Other rare colour photographs of Guevara's body by AFP correspondent Marc Hutten, taken after it was laid out by Bolivian soldiers, were published in the international media at the time.
The missionary's stash of pictures also includes a photo purportedly of the body of Guevara's revolutionary companion Tamara Bunke, laid on a stretcher with her face disfigured.
An Argentine-born doctor, Ernesto "Che" Guevara came to world prominence as a senior member of Fidel Castro's revolutionary regime in Cuba.
Hunted by the CIA, he was captured by the military in Bolivia on October 8, 1967, and executed the following day.
Arteaga believes it was Hutten who gave the photographs to Cuartero, possibly as a means of getting them quickly out of the country.
"He asked my uncle to take the photos because he was the only European leaving Bolivia at that moment."
After Arteaga rediscovered the pictures, he said, "I searched on the Internet for 'French journalist Che dead', and Hutten's name came up, along with some photos that are just like mine."
After Cuartero took the photos, his family had no further contact with Hutten, who died in March 2012, shortly before the missionary himself.
"Hutten told us he had sent four or five reels of photos to AFP in Paris," said Sylvain Estibal, current head of photography for the Europe and African region at the world news agency.