Addressing a gathering of students in Vadodara on the second day of his election campaign in Gujarat, Gandhi said that in contrast, women work at every level in the Congress.
Union minister and senior BJP leader Smriti Irani slammed Gandhi's remark as "indecent."
"The BJP's thinking is that till women are silent they are good, when they start speaking up they try to shut them (women) up."
Khakhi shorts were a trademark of RSS volunteers which they used to wear during their drills in the past, before they changed to full pants over an year back.
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Gandhi also said that if his party's government comes to power in Gujarat, it will give importance to women and try to resolve their issues.
"If Rahulji believes that wearing shorts in India is the sign of empowerment, as a woman I want to contradict it," Irani told reporters in Amethi, the home turf of the Gandhi family in Uttar Pradesh.
"Today, an indecent comment has been made on our sisters connected with the Sangh, the Rashtriya Sevika Sangh or the sisters, wives and sisters-in-law of ordinary Sangh workers," Irani added.