Hagel, during a speech in 2011 said, "India for some time has always used Afghanistan as a second front, and India has over the years financed problems for Pakistan on that side of the border".
Malik told reporters here that he had asked Afghanistan President Hamid Karzai and Indian authorities to clear their positions on the matter.
"I ask Afghanistan to clear its position that it is not involved in any terrorist activity. We have done the best on our part. I hope proper clarification would be issued, otherwise I would demand apology from both India and Afghanistan," he added.
He said Pakistan has decided to control illegal crossing of Pak-Afghan border from next month, adding nobody without legal documents would be allowed to cross the border from March 8.
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Pakistan and Afghanistan have over 2000 kilometres porous border and both countries routinely complain against each other of failure to check illegal cross-border movement.
The Interior Minister said Pakistan and Iran have agreed to set up four check posts two each on Pakistani and Iranian side of the Pak-Iran border at Taftan.
Iranian Interior Minister would visit Pakistan soon to finalise modalities in this regard, he said, adding duty free trade zones would also be established near the check posts.
To a question about dialogue with the Taliban, the minister said that Taliban should bring forward reasonable people for the talks.
"We had offered the Taliban dialogue on different occasions but these offers were rejected," he said, adding the Taliban can move forward in an appropriate manner by appointing reasonable persons for talks.