IOM plans to create a humanitarian bridge between Yemen and Sudan and Yemen and Ethiopia.
"With this launching of the humanitarian bridge between Sanaa and Khartoum, the Sudanese government has helped IOM in a very complicated humanitarian operation," said Mario Lito Malanca, IOM's Sudan Chief of Mission.
The passenger roster includes nationals from Sudan, Ethiopia, US, Nigeria, South Korea, Syria, Iraq, Indonesia and several European nations.
The global inter-governmental organisation for migration expects to fly several rotations daily between Khartoum and Sanaa and also start another round of rotations between Sanaa and Addis-Ababa.
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"Hopefully we'll be a little more organised tomorrow, when we do our next flight," said Saba Malme, Operations Coordinator for IOM Yemen.
Yemen, a country of 25 million which is one of the poorest in West Asia, has been bombarded by one of the richest countries in the Arab world, Saudi Arabia with a coalition of Egypt and other Gulf countries, supported by the US in an effort to ward off Shia Houthi rebels who deposed Yemeni President Abd Rabbuh Mansur Hadi.
United Nations Children's Fund (UNICEF) and the International Committee of the Red Cross (ICRC) sent more than 30 tonnes of medical equipment after days of negotiations to allow them to fly their planes which landed in Sanaa.