Besides the clash in Sonipat which also left nine people injured, fresh incidents of arson and violence erupted in several districts including Rohtak, Kaithal and Hissar.
As protesters continued to block some roads including the arterial Delhi-Ambala Highway, the Centre directed security forces to use force to clear blockades.
"The security forces were asked to use force to clear all the places where the protesters were squatting affecting communication network and water supply," a Union Government official said in Delhi.
Sonipat Deputy Commissioner Rajiv Rattan said personnel of Army, paramilitary forces and the police who were trying to clear a road blockade in the district were attacked by the mob which pelted stones on them and also used lathis. Some security pesonnel were also injured.
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A police spokesman in Sonipat said the three killed in the clash were identified as Sunny (of Gandhi Nagar), Rajesh (Samli), both of Ganaur area and Sandeep (Phansi, Sonipat).
The latest incident came within hours after two columns of the Army comprising around 150 personnel, besides CRPF and Haryana Police contingents took control of the Munak canal at around 4 AM today from protesters who had cut off the water supply to Delhi, from Akbarpur-Barota in Sonipat.
Following fresh incidents of arson and violence, curfew was reimposed in five villages of Hansi sub-division, Hissar city limits and Kaithal. Curfew was imposed in five villages of the district and shoot-at-sight orders issued following a face-off between Jats and other community members.
Making a fresh appeal for an end to the agitation, Sharma said a Bill will be brought in the coming Assembly session of on the Jat reservation issue.
When asked what will be the shape of the Bill, he said the date for the commencement of the assembly session was yet to be decided and did not elaborate on the details.
The Jat protesters also continued to block some roads including in Rohtak, Hissar and Bhiwani districts.
Railway traffic from Hissar to various destinations including Delhi, Ludhiana, Bhiwani and Sadulpur also remained suspended.