The victim identified as Manoj alias Kalwa, a native of Begamabad village, complained that Soni and Abid yesterday shot at him on Gang Nahar road, Station House Officer of Niwari police station, Nazeer Khan said.
Abid was earlier booked with four others for chopping off Manoj's genitals, he said.
Manoj, who was going towards Pachgaon village, was injured and admitted to a hospital, he said.
The accused will be nabbed soon, the SHO added.
On June 24, a group of five eunuchs chopped off genitals of Manoj who used to work with them as drummer.