In his petition, Munde challenged the decision of MCA and said the rejection of his nomination by the election officer S M Gorwadkar was "illegal" and prayed that the president's election be held once again.
Munde also prayed that Sharad Pawar, who was declared elected unopposed yesterday ahead of today's polls, should not take charge as MCA president and even if he assumes charge, should not be allowed to discharge the functions of the president.
It will come up for hearing tomorrow.
The former Maharashtra deputy CM, whose application to contest the polls was rejected by the election officer on the basis of his residential status, had appealed against the verdict but that too was rejected yesterday.
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Munde's application was rejected on Saturday as the address on his electoral registration was Beed.
According to MCA rules, only a Mumbai resident can become a governing member of the cricketing body.