Obama's latest appeal, in his weekly radio address, came the day after the US authorities expressed deepening worry about the spread of the mosquito-borne virus, urging that all donated blood be tested for Zika.
The Congress has denied past administration requests for Zika funding, instead redirecting funds that had been earmarked to fight Ebola, cancer and other diseases.
"That's not a sustainable solution," Obama said. The delay for more funds "puts more Americans at risk."
Zika infections in pregnant women can cause a severe birth defect known as microcephaly, in which babies develop abnormally small skulls and brains.
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More than 2,500 people in the United States have been diagnosed with Zika, along with more than 9,000 in Puerto Rico and other US territories, according to the Centers for Disease Control and Prevention. Most of those cases were brought in by people infected while traveling abroad.
Florida in July announced its first cases of locally transmitted Zika, with 42 infections.
The Food and Drug Administration revised its guidelines for blood donations yesterday, recommending that all donated blood be tested for the Zika virus. Its previous guideline issued in February recommended active screening of donated blood only in "areas with active Zika virus transmission."
Since there is "still much uncertainty regarding the nature and extent of Zika virus transmission," the recommendation for testing all donated blood "will help ensure that safe blood is available" for everyone, said Peter Marks, director of the Food and Drug Administration's Center for Biologics Evaluation and Research.
Donated blood is already being tested in Puerto Rico and Florida, where at least one unit of blood was found to contain the Zika virus and was intercepted, Marks told reporters on a conference call. Expanded blood supply testing "will be in effect until the risk of transfusion transmission of Zika virus is reduced," the FDA said.
Zika is primarily spread by the bite of an Aedes aegypti mosquito, but it can also be transmitted sexually.
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