On Sunday, UP minister of State for Food and Civil Supplies Rampal Rajwanshi inspected the godown, found some anomalies and ordered a probe, they said.
A team, headed by District Supply Officer Rakesh Saxena, checked the godown yesterday and found 8,409 quintals of wheat and rice missing.
The DSO said a report in this connection had been submitted to the District Magistrate.
Teams were constituted to check rest of the 18 godowns in the district, he said.