The World Health Organisation (WHO) officials in a meeting held last month had asked Pakistan to take measures to counter the import of the deadly virus.
Pakistan has invited a WHO team to inspect the country's preparedness levels on November 23.
"Airlines have been instructed to inform airports if they are carrying a passenger who has travelled to the countries where the Ebola epidemic is currently raging on," Director General (DG) Health Assad Hafeez was quoted as saying by the Dawn.
Hafeez said a team of health department officials will be on hand to receive the flagged individuals. They will be scanned and allowed to proceed out of the airport after obtaining their contact details and addresses.
More From This Section
He said the staff at hospitals was also trained in Ebola detection and containment and WHO is providing personal protection kits for doctors.
Hafeez said airlines had been instructed to bring in passengers who had travelled to West Africa to the three major international airports in Islamabad, Lahore and Karachi, because these are best equipped to receive such passengers.
Pakistan Army personnel posted to the peacekeeping missions in Africa are already being treated under a quarantine policy.
"Officials of the armed forces are monitored for 21 days in Africa and then they are sent back to Pakistan. Over the past two months, two chartered flights of officials who were on peacekeeping missions have arrived in the country. They were scanned at the time of arrival but not a single one was found to be infected with Ebola," Hafeez said.
She directed that the polio counter be moved to near the immigration counter and also ordered action against a doctor who was found absent from his post.