While scientists cited in the report stressed there was no danger to human health, the discovery raises concerns about safety practices and a lack of transparency at the Muehleberg nuclear plant in northwestern Switzerland.
The plant is believed to have caused a spike in cesium 137 found in the sediment of Lake Biel and dating back to 2000 through the discharge of contaminated waste water into the Aar river that feeds into the lake, about 20 kilometres (12 miles) downstream, the weekly reported.
The Muehleberg plant is permitted to discharge water with very low levels of radioactivity subject to strict controls several times a year, according to Le Matin Dimanche.
Politicians and environmentalists however expressed outrage today that the plant and nuclear inspectors had provided no information about the higher levels of cesium 137 released more than a decade ago into a lake that provides 68 percent of the drinking water to the nearby town of Biel.
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Environmental group Greenpeace voiced dismay at the news, urging the public prosecutor in the canton of Bern, where Biel and the Muehleberg plant are located, to investigate.
The group, which has long called for the plant's closure, also questioned in a statement how the Swiss Federal Nuclear Safety Inspectorate could have either missed the higher radioactive levels or decided not to inform decision makers or the public about them.
In the wake of the 2011 Fukushima disaster in Japan, the Swiss parliament approved a phase-out for the country's five atomic power plants by 2034.