Only 8.9 per cent of Hongkongers called themselves "Chinese" in the survey by the Chinese University of Hong Kong (CUHK), the lowest number since the poll began in 1996.
The weeks-long mass democracy protests which have brought parts of the city to a standstill had influenced the vote, said the head of CUHK's journalism school, which carries out the regular "Identity and National Identification of Hong Kong People" survey and published its latest findings yesterday.
Protesters are demanding fully free leadership elections for the semi-autonomous city in 2017.
But Beijing has refused to back down on its insistence that candidates must be vetted by a loyalist committee, a decision critics say is designed to ensure the election of a pro-Beijing stooge.
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"For the past five years people have started to realise that they have to come up with their own future... It seems that some of them may be disappointed that that procedure is not totally in the hands of the Hong Kong people," he added.
In the most recent poll, more than a quarter of the 810 interviewed said they were "Hongkongers".
Another 42 per cent said they were primarily "Hongkongers" but were also Chinese.
In 2010, over 16 per cent of participants of the same poll identified themselves as "Chinese", while 12.6 per cent did so in 2012.
The city maintains a semi-autonomous status with its own legal and financial system and civil liberties not seen on the mainland, including the right to protest under the "one country, two systems" model.