The Centre's response came on a petition alleging that various agencies were "trafficking" technical navy professionals to foreign ships and making them work without proper safety and security.
The affidavit filed before a bench of Chief Justice G Rohini and Justice P S Teji said that the "Merchant Shipping Act 1958 contains provisions for registration, certification, safety and security of Indian ships and seafarers in the manner best suited to serve the national interest".
"Yet the aspect of security of the rights of all seafarers to decent employment could not be enforced by a manpower- providing country on the foreign flag vessels for want of limitation of jurisdictional aspect," the affidavit added.
Earlier, the court had sought response from the Shipping Ministry and External Affairs Ministry on the public interest litigation (PIL) filed by a mother who lost her 22-year-old son after a ship with 15 Indian sailors on board exploded off Nigeria's territorial waters.