The Note 7 discontinuation will cost in the mid-2 trillion won range during the October-December period and another 1 trillion won (USD 884 million) during the January-March quarter, the company said in a statement.
Samsung already slashed its third-quarter profit forecast by USD 2.6 billion earlier this week, an amount that could wipe out its entire mobile business profit. That did not include the cost of Samsung's first recall, which analysts estimated at 1 trillion won to 2 trillion won.
Samsung added that it will make significant changes in its quality assurance processes to improve product safety. It did not elaborate.
The company said it will expand sales of two other smartphones released in spring, the Galaxy S7 and Galaxy S7 Edge, quashing rumors that it may try to release updated versions of those devices.
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More than 2.5 million Galaxy Note 7 smartphones were recalled due to the unexplained overheating problems before Samsung gave up the product earlier this week, just two months after its launch in August.
In the US, 1.9 million Note 7 phones are subject to the two recalls. Samsung also recalled about 200,000 phones in China and about half a million phones in South Korea.
The US Consumer Product Safety Commission said there were 96 reports of batteries in Note 7 phones overheating in the country, including 23 new reports since the first recall announcement last month. The company received 13 reports of burns and 47 reports of property damage associated with the phones.