The fake papers had been submitted to conferences on computer science and engineering whose proceedings were published in specialised, subscription-only publications, Springer said.
"We are in the process of taking down the papers as quickly as possible," the German-based publisher said in a statement yesterday.
"This means that they will be removed, not retracted, since they are all nonsense."
Springer added: "We are looking into our procedures to find the weakness that could allow something like this to happen, and we will adapt our processes to ensure that it does not happen again."
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He also spotted more than 100 other "nonsense" papers unwittingly published by the New York-based Institute of Electrical and Electronic Engineers (IEEE), the journal Nature reported.
In a statement to AFP, the institute said it had been advised "there might have been some conference papers published in our IEEE Xplore digital library that did not meet our quality standards."
"We took immediate action to remove those papers, and also refined our processes to prevent papers not meeting our standards from being published in the future," it said. The statement gave no further details.
At the press of a button, the programme cranks out impressive-looking "studies" stuffed with randomly-selected computer and engineering terms.
Here is an example: "Constant-time technology and access points have garnered great interest from both futurists and physicists in the last several years. After years of extensive research into superpages, we confirm the appropriate unification of 128-bit architectures and checksums."
This "paper" comes complete with fake graphs and citations -- essential features in scientific publishing -- that in SCIgen's case includes recent references to famous scientists who died decades or centuries ago.
They used it to concoct meaningless papers that were accepted by conferences. The researchers later revealed the hoax to expose flaws in safeguards.
Labbe told AFP he spotted the frauds by searching for telltale SCIgen vocabulary.
In 2010, he used SCIgen to create 102 bogus papers by a fictitious scientist and added these to the Google Scholar database, an index of science prestige.
For a time, "Ike Antkare" ranked 21st on the database's list of most-cited scientists in the world -- higher than Einstein, who ranked a lowly 36th.
Labbe said the fraud struck at the credibility of peer-reviewed systems in which scientific claims are meant to be assessed by independent experts for soundness.
Also Yesterday, South Korea's Supreme Court upheld an 18-month suspended jail term against Hwang Woo-Suk, accused of embezzlement and abuse of ethics in one of the most notorious frauds in science publishing.
Hwang shot to fame in 2004 when he published papers in the prestigious US journal Science claiming to have created the first stem-cell lines from a cloned human embryo.