The voting was held on Saturday and the counting of votes took place today.
The NCP retained only Pune local bodies seat while Congress retained Nanded and wrested Sangli-Satara local bodies constituency from NCP. The BJP retained the Jalgaon local bodies seat.
The Sharad Pawar-led party lost Bhandara-Gondia to BJP and Yavatmal to Shiv Sena.
The loss in Sangli-Satara is a huge blow to NCP as it had earlier refused to yield to Congress's demand for 3:3 formula of seat-sharing for the six seats.
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State NCP chief Sunil Tatkare had earlier alleged the alliance fell through because of Chavan's adamant attitude. He had also questioned how Congress could demand the seat when NCP had more numbers. The NCP backed an independent in Nanded, the stronghold of state Congress president Ashok Chavan.
As per the figures given by state electoral office, Amar Rajurkar (Congress) polled 251 as against 208 votes received by independent Shyamsunder Shinde.
Congress's Mohan Kadam bagged 309 votes as against 246 by Shekhar Gore(NCP) in Sangli-Satara.
133 of Ashok Yenpure (BJP). Congress candidate Sanjay Jagtap finished a poor third with 71 votes.
In Jalgaon, Chandulal Patel (BJP) polled 421 votes. Independent Vijay Patil polled 90 votes while remaining six independents drew a blank.
In Bhandara-Gondia, Parinay Phuke of BJP trounced NCP's Rajendra Jain, who polled 137 votes and Praful Agrawal of Congress who got 112 votes.
In the 78-member Upper House, Congress now has 20 members, the NCP tally has been reduced to 23, while BJP has 18, and Shiv Sena has nine members.
However, NCP continues to be the single largest party in the House.
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The loss in Bhandara-Gondia is seen as setback to the NCP especially for senior leader Praful Patel, who hails from the region.
Patel's trusted lieutenant and sitting MLC Rajendra Jain lost to first timer Parinay Phuke who is considered close to Maharashtra Chief Minister Devendra Fadnavis.
Another candidate Praful Agarwal, son of sitting Congress MLA Gopaldas Agarwal, finished third with 113 votes.
The Congress and NCP fought independently in the MLC elections held on November 20.
A two-term MLC Jain was trying his fortune for the third successive time. In the first term, Jain was an NCP candidate while when he contested for the second time, he was candidate of the Congress-NCP alliance.
Phuke was presently a corporator in BJP-ruled Nagpur Municipal Corporation (NMC).
He gained confidence of Fadnavis and is said to move closer to him. He could be seen around the Chief Minister, sources said.
Meanwhile, a Congress leader on condition of anonymity told