"Some represented Bernie, our communist friend," the controversial real estate tycoon alleged in Dayton, Ohio. He repeated this at his other rally in Cleveland.
"You know Bernie was saying Mr Trump should speak to his crowd. You know where they come from? Bernie's crowd. They're Bernie's crowd," Trump said.
The allegations by Trump was immediately denied by the Sanders campaign and disassociated with the protestors who were chanting "Bernie Bernie" at Trump's Chicago rally.
"Get your people in line, Bernie," Trump said at his Cleveland rally, as he launched a frontal attack on Sanders.
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Sanders, the Democratic Senator from Vermont, who is running his presidential campaign on the slogan of democratic socialism, was quick to fire back.
"As is the case virtually every day, Donald Trump is showing the American people that he is a pathological liar. Obviously, while I appreciate that we had supporters at Trump's rally in Chicago, our campaign did not organise the protests," Sanders said in a statement.
"What caused the violence at Trump's rally is a campaign whose words and actions have encouraged it on the part of his supporters . He recently said of a protester, 'I want to punch him in the face.' Another time Trump yearned for the old days when the protester would have been punched and "carried out on a stretcher," he added.
"Then just a few days ago a female reporter apparently was assaulted by his campaign manager," Sanders said.
"What Donald Trump must do now is stop provoking violence and make it clear to his supporters that people who attend his rallies or protest should not be assaulted, should not be punched, should not be kicked. In America people have a right to attend a political rally without fear of physical harm," Sanders said.