Defence officials say senior administration leaders discussed the delivery and decided to let it continue. The fighters are part of a USD 1.3 billion package approved in 2010 that included 20 F-16s and some M1A1 Abrams tank kits.
About half of the aid package has been dispersed, officials said.
Eight of the F-16s were delivered in January, the next four are expected to be delivered in the coming weeks and the final eight will be sent later this year.
The White House and State Department reiterated the view yesterday that it would not be in the United States' national security interests to interrupt US aid to Egypt, including to the armed forces, as would be required by law if Morsi's ouster is determined to have been a coup.
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"We do not believe it is in the best interests of the United States to make immediate changes to our assistance programs," White House press secretary Jay Carney told reporters, adding that the administration is going to take its time to make any determinations about the removal of Morsi from power.
The comments come after a week of violence and widespread demonstrations and as Defence Secretary Chuck Hagel and other US leaders make repeated calls to their counterparts in Egypt urging an end to the violence and a quick transition to a civilian government.
Hagel has spoken to Egypt's defence minister, Gen Abdel-Fattah el-Sissi, eight times in the last nine days, with one phone call lasting as long as 45 minutes.