Besides him, 17 other officers have been appointed as Joint Secretaries in various central government departments.
The Appointments Committee of Cabinet (ACC) has approved appointment of Dwivedi to the post till September next year, when he completes five year of central deputation period, an order by Department of Personnel and Training (DoPT) said.
His suspension was revoked last month by the Centre, following representation from senior IAS officers, and Dwivedi was placed on compulsory wait in the DoPT.
It was alleged that due diligence was not carried out before facilitating renewal of the licence given under Foreign Contribution Regulation Act (FCRA) to the NGO of Naik, who has been accused of brain washing youths into joining terror groups. However, his organisation has denied all these charges.
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The ACC has approved appointment of four Joint Secretaries in Home Ministry. They are Praveen Kumar Srivastava, C K Khetan, Saheli G Roy and Sanjeev K Jindal.
While IAS officer Srivastava, CSS officers Roy and Jindal have been appointed in the Home Ministry for five years,Khetan will have tenure as Additional Registrar General (JS level), in the office of Registrar General and Census Commissioner of India under the Home Ministry, till March 14, 2017.
Rakesh Kumar Singh will be Additional Secretary (JS level) in Central Information Commission. Maninder Kaur Dwivedi has been appointed Adviser in Niti Aayog.
IPS officer Mukesh Jain will be Joint Secretary and Chief Executive Officer, National Trust for Welfare of Persons with Autism, Cerebral Palsy, Mental Retardation and Multiple Disabilities.