On Thursday, the 50-year-old actor took his daughter to East Hampton, New York, for a "beach vacation," a source said.
Cruise was first spotted with Suri in New York City June 17, less than a week after he and Holmes, 33, reached a divorce settlement.
The actor's father-daughter day in East Hampton didn't last long, however; they chartered a helicopter back to New York City mid-afternoon. Later that night, Holmes escorted Suri to her gymnastics class at Chelsea Piers.
A source recently confirmed that Holmes, who is renting an apartment in New York City's Chelsea neighborhood, will retain primary custody of Suri. The reason Cruise hadn't seen his daughter until this week, according to his attorney, Bert Fields, is purely logistical.
